TY - JOUR
T1 - Exome-wide association study reveals novel susceptibility genes to sporadic dilated cardiomyopathy
AU - Esslinger, Ulrike
AU - Garnier, Sophie
AU - Korniat, Agathe
AU - Proust, Carole
AU - Müller-Nurasyid, Martina
AU - Empana, Jean Philippe
AU - Morley, Michael P.
AU - Perret, Claire
AU - Stark, Klaus
AU - Bick, Alexander G.
AU - Prasad, Sanjay K.
AU - Kriebel, Jennifer
AU - Li, Jin
AU - Tiret, Laurence
AU - Strauch, Konstantin
AU - O'Regan, Declan P.
AU - Marguiles, Kenneth B.
AU - Seidman, Jonathan G.
AU - Boutouyrie, Pierre
AU - Lacolley, Patrick
AU - Jouven, Xavier
AU - Hengstenberg, Christian
AU - Komajda, Michel
AU - Hakonarson, Hakon
AU - Isnard, Richard
AU - Arbustini, Eloisa
AU - Grallert, Harald
AU - Cook, Stuart A.
AU - Seidman, Christine E.
AU - Regitz-Zagrosek, Vera
AU - Cappola, Thomas P.
AU - Charron, Philippe
AU - Cambien, François
AU - Villard, Eric
N1 - Publisher Copyright: © This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.
PY - 2017/3
Y1 - 2017/3
N2 - Aims Dilated cardiomyopathy (DCM) is an important cause of heart failure with a strong familial component. We performed an exome-wide array-based association study (EWAS) to assess the contribution of missense variants to sporadic DCM. Methods and results 116,855 single nucleotide variants (SNVs) were analyzed in 2796 DCM patients and 6877 control subjects from 6 populations of European ancestry. We confirmed two previously identified associations with SNVs in BAG3 and ZBTB17 and discovered six novel DCMassociated loci (Q-value0.01). The lead-SNVs at novel loci are common and located in TTN, SLC39A8, MLIP, FLNC, ALPK3 and FHOD3. In silico fine mapping identified HSPB7 as the most likely candidate at the ZBTB17 locus. Rare variant analysis (MAF0.01) demonstrated significant association for TTN variants only (P = 0.0085). All candidate genes but one (SLC39A8) exhibit preferential expression in striated muscle tissues and mutations in TTN, BAG3, FLNC and FHOD3 are known to cause familial cardiomyopathy. We also investigated a panel of 48 known cardiomyopathy genes. Collectively, rare (n = 228, P = 0.0033) or common (n = 36, P = 0.019) variants with elevated in silico severity scores were associated with DCM, indicating that the spectrum of genes contributing to sporadic DCM extends beyond those identified here. Conclusion We identified eight loci independently associated with sporadic DCM. The functions of the best candidate genes at these loci suggest that proteostasis regulation might play a role in DCM pathophysiology.
AB - Aims Dilated cardiomyopathy (DCM) is an important cause of heart failure with a strong familial component. We performed an exome-wide array-based association study (EWAS) to assess the contribution of missense variants to sporadic DCM. Methods and results 116,855 single nucleotide variants (SNVs) were analyzed in 2796 DCM patients and 6877 control subjects from 6 populations of European ancestry. We confirmed two previously identified associations with SNVs in BAG3 and ZBTB17 and discovered six novel DCMassociated loci (Q-value0.01). The lead-SNVs at novel loci are common and located in TTN, SLC39A8, MLIP, FLNC, ALPK3 and FHOD3. In silico fine mapping identified HSPB7 as the most likely candidate at the ZBTB17 locus. Rare variant analysis (MAF0.01) demonstrated significant association for TTN variants only (P = 0.0085). All candidate genes but one (SLC39A8) exhibit preferential expression in striated muscle tissues and mutations in TTN, BAG3, FLNC and FHOD3 are known to cause familial cardiomyopathy. We also investigated a panel of 48 known cardiomyopathy genes. Collectively, rare (n = 228, P = 0.0033) or common (n = 36, P = 0.019) variants with elevated in silico severity scores were associated with DCM, indicating that the spectrum of genes contributing to sporadic DCM extends beyond those identified here. Conclusion We identified eight loci independently associated with sporadic DCM. The functions of the best candidate genes at these loci suggest that proteostasis regulation might play a role in DCM pathophysiology.
UR - https://www.scopus.com/pages/publications/85015292949
U2 - 10.1371/journal.pone.0172995
DO - 10.1371/journal.pone.0172995
M3 - Article
C2 - 28296976
SN - 1932-6203
VL - 12
JO - PLoS ONE
JF - PLoS ONE
IS - 3
M1 - e0172995
ER -