Synthetic biology tools for novel secondary metabolite discovery in streptomyces

  • Namil Lee
  • , Soonkyu Hwang
  • , Yongjae Lee
  • , Suhyung Cho
  • , Bernhard Palsson
  • , Byung Kwan Cho

Research output: Contribution to journalReview articlepeer-review

Abstract

Streptomyces are attractive microbial cell factories that have industrial capability to produce a wide array of bioactive secondary metabolites. However, the genetic potential of the Streptomyces species has not been fully utilized because most of their secondary metabolite biosynthetic gene clusters (SM-BGCs) are silent under laboratory culture conditions. In an effort to activate SM-BGCs encoded in Streptomyces genomes, synthetic biology has emerged as a robust strategy to understand, design, and engineer the biosynthetic capability of Streptomyces secondary metabolites. In this regard, diverse synthetic biology tools have been developed for Streptomyces species with technical advances in DNA synthesis, sequencing, and editing. Here, we review recent progress in the development of synthetic biology tools for the production of novel secondary metabolites in Streptomyces, including genomic elements and genome engineering tools for Streptomyces, the heterologous gene expression strategy of designed biosynthetic gene clusters in the Streptomyces chassis strain, and future directions to expand diversity of novel secondary metabolites.

Original languageEnglish
Pages (from-to)667-686
Number of pages20
JournalJournal of Microbiology and Biotechnology
Volume29
Issue number5
DOIs
Publication statusPublished - 28 May 2019

Bibliographical note

Funding Information: This research was also supported by the Basic Science Research Program (2018R1A1A3A04079196 to S.C.), the Basic Core Technology Development Program for the Oceans and the Polar Regions (2016M1A5A1027458 to B.-K.C.), and the Bio & Medical Technology Development Program (2018M3A9F3079664 to B.-K.C.) through the National Research Foundation (NRF) funded by the Ministry of Science and ICT. Funding Information: This work was supported by a grant from the Novo Nordisk Foundation (grant number NNF10CC1016517). Publisher Copyright: © 2019.

Other keywords

  • Antibiotics
  • Biosynthetic gene cluster
  • CRISPR/Cas9
  • Genome editing
  • Heterologous expression
  • Secondary metabolites
  • Streptomyces
  • Synthetic biology

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